Why is "Gene regulatory network" trending?

Search Interest Perspective

• Gene regulatory network transitions reveal the central transcription factors in lung adenocarcinoma progression - Nature
• CellPolaris: Transfer Learning for Gene Regulatory Network Construction to Guide Cell State Transitions - Wiley
• Species-specific gene regulatory network rewiring mediated by the GATA-type regulator NsdD in Aspergillus - ASM Journals
• A reduced TBX5-dependent gene regulatory network links atrial fibrillation and heart failure - Nature
• Validation of the directed network flow entropy (DNFE) method based on simulation datasets. - PLOS
• Stern lab publishes a major study on the gene regulatory network for neural induction - UCL | University College London
• Controllability of the gene regulatory network in zebrafish embryogenesis - Nature
• Defining the role of β-cell IRE1α/XBP1 pathway and its gene regulatory network components in non-obese diabetic mice - Nature
• Whole body regeneration deploys a rewired embryonic gene regulatory network logic - Nature
• Dissecting the enhancer gene regulatory network in early Drosophila spermatogenesis - Nature
• Investigating prognostic features in high-grade serous ovarian cancer through gene regulatory network inference with single-cell transcriptomic profiles - Nature
• Associative conditioning in gene regulatory network models increases integrative causal emergence - Nature
• Cellular patterns in Arabidopsis root epidermis emerge from gene regulatory network and diffusion dynamical feedback - Nature
• A cell type and state specific gene regulation network inference method for immune regulatory analysis - Nature
• Gene regulatory network inference in the era of single-cell multi-omics - Nature
• Divergence in the ABA gene regulatory network underlies differential growth control - Nature
• Dictys: dynamic gene regulatory network dissects developmental continuum with single-cell multiomics - Nature
• Decoding the gene regulatory network of endosperm differentiation in maize - Nature
• The urothelial gene regulatory network: understanding biology to improve bladder cancer management - Nature
• Gene regulatory network reconstruction: harnessing the power of single-cell multi-omic data - Nature
• Gene regulatory network inference during cell fate decisions by perturbation strategies - Nature
• Knowledge of the perturbation design is essential for accurate gene regulatory network inference - Nature
• Redeployment of odontode gene regulatory network underlies dermal denticle formation and evolution in suckermouth armored catfish - Nature
• Benchmarking algorithms for gene regulatory network inference from single-cell transcriptomic data - Nature
• Identifying a gene-regulatory network that drives fibromuscular dysplasia - Nature
• A spatio-temporally constrained gene regulatory network directed by PBX1/2 acquires limb patterning specificity via HAND2 - Nature
• CBFA2T3-GLIS2 mediates transcriptional regulation of developmental pathways through a gene regulatory network - Nature
• Curation, inference, and assessment of a globally reconstructed gene regulatory network for Streptomyces coelicolor - Nature
• Recent reconfiguration of an ancient developmental gene regulatory network in Heliocidaris sea urchins - Nature
• An ancient, conserved gene regulatory network led to the rise of oral venom systems - PNAS
• PRC1 suppresses a female gene regulatory network to ensure testicular differentiation - Nature
• Co-option of plant gene regulatory network in nutrient responses during terrestrialization - Nature
• The transcription factor OCT6 promotes the dissolution of the naïve pluripotent state by repressing Nanog and activating a formative state gene regulatory network | Scientific Reports - Nature
• Natural cryptic variation in epigenetic modulation of an embryonic gene regulatory network - PNAS
• A missing link in the sea urchin embryo gene regulatory network: hesC and the double-negative specification of micromeres - PNAS
• Evaluating the Reproducibility of Single-Cell Gene Regulatory Network Inference Algorithms - Frontiers
• A copy-and-paste gene regulatory network - Science | AAAS
• Gene regulatory network resource aids in predicting trans-acting regulators of biosynthetic gene clusters in Aspergillus fumigatus - ASM Journals
• Evolutionary plasticity of developmental gene regulatory network architecture - PNAS
• Cis -regulatory interfaces reveal the molecular mechanisms underlying the notochord gene regulatory network of Ciona - Nature
• Enabling comparative gene regulatory network analysis on single-cell data with SCORPION - Nature
• Diet-induced rewiring of the Wnt gene regulatory network connects aberrant splicing to fatty liver and liver cancer in DIAMOND mice - Nature
• Gene regulatory network inference from sparsely sampled noisy data - Nature
• The gene regulatory network for breast cancer: integrated regulatory landscape of cancer hallmarks - Frontiers
• Identification and interrogation of the gene regulatory network of CEBPA -double mutant acute myeloid leukemia - Nature
• A scalable SCENIC workflow for single-cell gene regulatory network analysis - Nature
• Time-course swRNA-seq uncovers a hierarchical gene regulatory network in controlling the response-repair-remodeling after wounding | Communications Biology - Nature
• MicroRNAs provide negative feedback and stability in gene regulatory network models of cell-state transitions - Frontiers
• Topological analysis of interaction patterns in cancer-specific gene regulatory network: persistent homology approach - Nature
• ANAC032 regulates root growth through the MYB30 gene regulatory network - Nature
• Data-driven modeling of core gene regulatory network underlying leukemogenesis in IDH mutant AML - Nature
• Global gene regulatory network underlying miR165a in Arabidopsis shoot apical meristem - Nature
• An overview of the gene regulatory network controlling trichome development in the model plant, Arabidopsis - Frontiers
• A conserved gene regulatory network controls root epidermal cell patterning in superrosid species - Wiley
• An Anterior Second Heart Field Enhancer Regulates the Gene Regulatory Network of the Cardiac Outflow Tract - American Heart Association Journals
• Gene regulatory network inference using fused LASSO on multiple data sets - Nature
• Towards a gene regulatory network shaping the fins of the Princess cichlid - Nature
• Whole transcriptome sequencing revealed the gene regulatory network of hypoxic response in yak Sertoli cells - Nature
• Gene-regulatory network analysis of ankylosing spondylitis with a single-cell chromatin accessible assay - Nature
• Improving Gene Regulatory Network Inference by Incorporating Rates of Transcriptional Changes | Scientific Reports - Nature
• A gene regulatory network in mouse embryonic stem cells - PNAS
• Butterfly Eyespots Reuse Gene Regulatory Network - Lab Manager
• Joining the dots: How gene regulatory network tools are unearthing drugs - Pharmaceutical Technology
• Exploring the effect of network topology, mRNA and protein dynamics on gene regulatory network stability - Nature
• Evolution of the mammalian embryonic pluripotency gene regulatory network - PNAS
• Gene regulatory network resource aids in predicting trans-acting regulators of biosynthetic gene clusters in Aspergillus fumigatus - ASM Journals
• Reconstruction of gene regulatory network related to photosynthesis in Arabidopsis thaliana - Frontiers
• Gene regulatory network inference based on causal discovery integrating with graph neural network - EurekAlert!
• An order independent algorithm for inferring gene regulatory network using quantile value for conditional independence tests - Nature
• Construction of the gene regulatory network identifies MYC as a transcriptional regulator of SWI/SNF complex - Nature
• Optimal Sparsity Selection Based on an Information Criterion for Accurate Gene Regulatory Network Inference - Frontiers
• Applying gene regulatory network logic to the evolution of social behavior - PNAS
• Gene Regulatory Network Inference and Gene Module Regulating Virulence in Fusarium oxysporum - Frontiers
• Gene Regulatory Network Guided Investigations and Engineering of Storage Root Development in Root Crops - Frontiers
• Enhancing gene regulatory network inference through data integration with markov random fields - Nature
• Deconstructing the pluripotency gene regulatory network - Nature
• Temporal flexibility of gene regulatory network underlies a novel wing pattern in flies - PNAS
• Multi-modular structure of the gene regulatory network for specification and commitment of murine T cells - Frontiers
• Identification and characterization of Eco-miR 169-EcNF-YA13 gene regulatory network reveal their role in conferring tolerance to dehydration and salinity stress in finger millet - Nature
• CSER: a gene regulatory network construction method based on causal strength and ensemble regression - Frontiers
• A genome-wide assessment of the ancestral neural crest gene regulatory network - Nature
• Gene Regulatory Network Homoplasy Underlies Recurrent Sexually Dimorphic Fruit Fly Pigmentation - Frontiers
• A gene regulatory network to control EMT programs in development and disease - Nature
• Single-cell RNA-seq public data reveal the gene regulatory network landscape of respiratory epithelial and peripheral immune cells in COVID-19 patients - Frontiers
• Developmental gene regulatory network architecture across 500 million years of echinoderm evolution - PNAS
• Bioenergy sorghum nodal root bud development: morphometric, transcriptomic and gene regulatory network analysis - Frontiers
• BMP2-dependent gene regulatory network analysis reveals Klf4 as a novel transcription factor of osteoblast differentiation - Nature
• NetDiff – Bayesian model selection for differential gene regulatory network inference - Nature
• Gene Regulatory Network Inference: Connecting Plant Biology and Mathematical Modeling - Frontiers
• Editorial: Methods in genome, pan-genome, pan-transcriptome, and gene regulatory network (GRN) construction and analysis - Frontiers
• An Arabidopsis gene regulatory network for secondary cell wall synthesis - Nature
• Smart software untangles gene regulation in cells - Nature
• Morphogenesis in sea urchin embryos: linking cellular events to gene regulatory network states - Wiley Interdisciplinary Reviews
• Growth-regulating factor 5 (GRF5)-mediated gene regulatory network promotes leaf growth and expansion in poplar - Wiley
• A gene regulatory network in Arabidopsis roots reveals features and regulators of the plant response to elevated CO2 - Wiley
• Dynamic modeling of transcriptional gene regulatory network uncovers distinct pathways during the onset of Arabidopsis leaf senescence - Nature
• Boolean model of the gene regulatory network of Pseudomonas aeruginosa CCBH4851 - Frontiers
• Gene Regulatory Network Modeling of Macrophage Differentiation Corroborates the Continuum Hypothesis of Polarization States - Frontiers
• Study of hub nodes of transcription factor-target gene regulatory network and immune mechanism for type 2 diabetes based on chip analysis of GEO database - Frontiers
• Population-level comparisons of gene regulatory networks modeled on high-throughput single-cell transcriptomics data - Nature